Register list for 16 new names including Andeanibacterium gen. nov.
Submitted by Díaz-García, Laura
Genus Andeanibacterium
- Etymology
- [An.de.a.ni.bac.te'ri.um] N.L. masc. adj. andeanus, pertaining to the Andes; N.L. neut. n. bacterium, small rod; N.L. neut. n. Andeanibacterium, Andean rod
- Nomenclatural type
- Species Andeanibacterium colombienseTs
- Description
-
A genus established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction, and phylogenomic analyses and is classified as a member of the Sphingomonadaceae family. Genomic metrics include ANI (79.88), AAI (61.59) and dDDH d4 (20.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 54 CAZymes, 15 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Andeanibacterium
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24097
Species Cohnella colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119317.1 Ts
- Description
-
The species is established on the basis of MiGA taxonomic novelty analysis, the taxonmic placement using maximum likelihood trees with 120 bacterial marker genes (bac120) and and the type material is the genome MAG_2441. Genomic metrics include ANI (67.06), AAI (67.21) and dDDH d4 (30.4). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 149 CAZymes, 44 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Bacillota » Bacilli » Caryophanales » Paenibacillaceae » Cohnella » Cohnella colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24096
Species Brevundimonas colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119326.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_833. Genomic metrics include ANI (87.3), AAI (82.62) and dDDH d4 (29.7). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 73 CAZymes, 13 of them involved in lignocellulose degradation. In addition, putative genes for protocatechuate and phtalate catabolism were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Caulobacterales » Caulobacteraceae » Brevundimonas » Brevundimonas colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24108
Species Brevundimonas phytovorans
- Etymology
- [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
- Nomenclatural type
- INSDC Nucleotide: CP119309.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1865. Genomic metrics include ANI (91.28), AAI (87.92) and dDDH d4 (40.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 39 CAZymes, 6 of them involved in lignocellulose degradation. In addition, putative genes for protocatechuate and phtalate catabolism were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Caulobacterales » Caulobacteraceae » Brevundimonas » Brevundimonas phytovorans
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24099
Species Chryseobacterium colombiense
- Etymology
- [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119310.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1654. Genomic metrics include ANI (88.96), AAI (95) and dDDH d4 (36.2). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 139 CAZymes, 41 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Bacteroidota » Flavobacteriia » Flavobacteriales » Weeksellaceae » Chryseobacterium » Chryseobacterium colombiense
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24098
Species Pseudomonas phytovorans
- Etymology
- [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
- Nomenclatural type
- INSDC Nucleotide: CP119325.1 Ts
- Description
-
A genus established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_876. Genomic metrics include ANI (92.18), AAI (95) and dDDH d4 (47). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 87 CAZymes, 16 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolysis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Pseudomonadaceae » Pseudomonas » Pseudomonas phytovorans
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24109
Species Pseudobacter hemicellulosilyticus
- Etymology
- [he.mi.cel.lu.lo.si.ly'ti.cus] N.L. neut. n. hemicellulosum, hemicellulose; N.L. masc. adj. lyticus, able to dissolve; N.L. masc. adj. hemicellulosilyticus, hemicellulose dissolving
- Nomenclatural type
- INSDC Nucleotide: CP119311.1 Ts
- Description
-
The species is established on the basis of MiGA taxonomic novelty analysis, the taxonomic placement using maximum likelihood trees with 120 bacterial marker genes (bac120) and and the type material is the genome MAG_7. Genomic metrics include ANI (69.21), AAI (65.96) and dDDH d4 (22.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 237 CAZymes, 99 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Bacteroidota » Chitinophagia » Chitinophagales » Chitinophagaceae » Pseudobacter » Pseudobacter hemicellulosilyticus
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24095
Species Sphingomonas phytovorans
- Etymology
- [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
- Nomenclatural type
- INSDC Nucleotide: CP119314.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_3606. Genomic metrics include ANI (80.99), AAI (80.97) and dDDH d4 (22.2). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 95 CAZymes, 29 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Sphingomonas » Sphingomonas phytovorans
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24103
Species Microbacterium phytovorans
- Etymology
- [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. neut. part. adj. phytovorans, plant-devouring
- Nomenclatural type
- INSDC Nucleotide: CP119321.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_4610. Genomic metrics include ANI (82.28), AAI (73.07) and dDDH d4 (21.5). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 74 CAZymes, 31 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Actinomycetota » Actinomycetes » Micrococcales » Microbacteriaceae » Microbacterium » Microbacterium phytovorans
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24107
Species Devosia phytovorans
- Etymology
- [phy.to.vo'rans.] Gr. neut. n. phyton, plant; L. pres. part. vorans, devouring, destroying; N.L. fem. part. adj. phytovorans, plant-devouring
- Nomenclatural type
- INSDC Nucleotide: CP119312.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_4196. Genomic metrics include ANI (84.84), AAI (74.37) and dDDH d4 (23.5). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 90 CAZymes, 17 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Devosiaceae » Devosia » Devosia phytovorans
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24105
Species Microbacterium colombiense
- Etymology
- [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119308.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_1911. Genomic metrics include ANI (85.9), AAI (81.1) and dDDH d4 (28.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 82 CAZymes, 30 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Actinomycetota » Actinomycetes » Micrococcales » Microbacteriaceae » Microbacterium » Microbacterium colombiense
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24100
Species Kaistia colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119318.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_2176. Genomic metrics include ANI (86.41), AAI (77.29) and dDDH d4 (28.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 95 CAZymes, 18 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Hyphomicrobiales » Kaistiaceae » Kaistia » Kaistia colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24101
Species Sphingomonas colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119315.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_27. Genomic metrics include ANI (85.46), AAI (66.97) and dDDH d4 (20.8). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 59 CAZymes, 10 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Sphingomonas » Sphingomonas colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24102
Species Pseudomonas colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. fem. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119322.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_425. Genomic metrics include ANI (86.68), AAI (86.03) and dDDH d4 (29.3). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 103 CAZymes, 19 of them involved in lignocellulose degradation. In addition, putative genes for PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Gammaproteobacteria » Pseudomonadales » Pseudomonadaceae » Pseudomonas » Pseudomonas colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24106
Species Pedobacter colombiensis
- Etymology
- [co.lom.bi.en'sis] N.L. masc. adj. colombiensis, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119313.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction and the type material is the genome MAG_3858. Genomic metrics include ANI (81.7), AAI (81.02) and dDDH d4 (29.6). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 254 CAZymes, 63 of them involved in lignocellulose degradation. In addition, putative genes for PET and PUR hydrolisis were found within the MAG.
- Classification
- Bacteria » Bacteroidota » Sphingobacteriia » Sphingobacteriales » Sphingobacteriaceae » Pedobacter » Pedobacter colombiensis
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:24104
Species Andeanibacterium colombienseTs
- Etymology
- [co.lom.bi.en'se.] N.L. neut. adj. colombiense, belonging to Colombia
- Nomenclatural type
- INSDC Nucleotide: CP119316.1 Ts
- Description
-
A species established on the basis of MiGA taxonomic novelty analyses, AAI, dDDH, 16S rRNA gene phylogenetic reconstruction, and phylogenomic analyses and is classified as a member of the Sphingomonadaceae family. The type species of the genus is Andeanibacterium colombiense. Genomic metrics include ANI (79.88), AAI (61.59) and dDDH d4 (20.1). The MAG was reconstructed from lignocellulolytic bacterial consortium and encoded for 54 CAZymes, 15 of them involved in lignocellulose degradation. In addition, putative genes for PET hydrolisis were found within the MAG.
- Classification
- Bacteria » Pseudomonadota » Alphaproteobacteria » Sphingomonadales » Sphingomonadaceae » Andeanibacterium » Andeanibacterium colombienseTs
- References
-
Effective publication:
Díaz-García et al., 2024 [1]
- Registry URL
- https://seqco.de/i:31306
References
- Díaz-García et al. (2024). Andean soil-derived lignocellulolytic bacterial consortium as a source of novel taxa and putative plastic-active enzymes. Systematic and Applied Microbiology. DOI:10.1016/j.syapm.2023.126485
Register List Certificate of Validation
On behalf of the Committee on the Systematics of Prokaryotes Described from Sequence Data (SeqCode Committee), we hereby certify that the Register List seqco.de/r:-kiq_w89 submitted by Díaz-García, Laura and including 16 new names has been successfully validated.
Date of Priority:
2024-01-25 09:26 UTC
DOI: 10.57973/seqcode.r:-kiq_w89