SeqCode Registry
Register List https://seqco.de/r:2rggbgyb [2024]

Register list for 20 new names including Aadella gelida sp. nov.

Submitted by Allen, Michelle

Genus Aadella

Etymology
[Aa.del'la] N.L. fem. dim. n. Aadella, Named after AAD (Australian Antarctic Division)
Nomenclatural type
Species Aadella gelidaTs
Description
The genus belongs to the family Tantalellaceae, order Tantalellales, class Gorgyraia, phylum Omnitrophota. The description is currently the same as for the nomenclatural type of the genus, the species Aadella gelida.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Aadella
References
Effective publication: Williams et al., 2021 [1]

Genus Gorgyraea

Etymology
[Gor.gy'ra.e.a] N.L. fem. n. Gorgyraea, of Gorgyra, mythical denizen of the underworld in Greek mythology.
Nomenclatural type
Species Gorgyraea atricolaTs
Description
The genus belongs to the family Gorgyraeaceae, order Gorgyraeales, class Gorgyraia, phylum Omnitrophota. The description is currently the same as for the nomenclatural type of the genus, the species Gorgyraea atricola.
Classification
“Gorgyraeales” » “Gorgyraeaceae” » Gorgyraea
References
Effective publication: Williams et al., 2021 [1]

Genus Tantalella

Etymology
[Tan.ta'lel.la] N.L. fem. dim. n. Tantalella, Named for Tantalus (Gr. Tantalos), in Greek mythology, a mythical denizen of the underworld, condemned to being immersed in a lake.
Nomenclatural type
Species Tantalella remotaTs
Description
The genus belongs to the family Tantalellaceae, order Tantalellales, class Gorgyraia, phylum Omnitrophota. The description is currently the same as for the nomenclatural type of the genus, the species Tantalella remota.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Tantalella
References
Effective publication: Williams et al., 2021 [1]

Genus Aceula

Etymology
[Ace.u'la] N.L. fem. dim. n. Aceula, from the name of the locality (Ace Lake).
Nomenclatural type
Species Aceula lacicolaTs
Description
The description for this genus is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions designate this genus as heterotrophic and capable of the fermentation of glucose to acetyl-CoA through EMP pathway. Proteases and peptidases for the degradation of proteins to amino acids are present. Additionally, simple sugar transport and glycoside hydrolases are encoded by the genome and genes required for the synthesis of trehalose and glycogen are also present (Williams et al., 2021). A V-type ATPase, respiratory F-type ATPase and Rnf complex for ATP synthesis, and a Group 3d [NiFe] hydrogenase are present (Williams et al., 2021). All genes required for the tight-adherence complex and the production of a Type-4a pilus are present. The nomenclatural type for the genus is Aceula lacicola, (genome designated 3300035698_1100).
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Aceulaceae” » Aceula
References
Effective publication: Williams et al., 2021 [1]

Genus Saelkia

Etymology
[Sa.el'ki.a] N.L. fem. n. Saelkia, after saelkie or selkie, mythical water creature of Celtic and Norse folklore.
Nomenclatural type
Species Saelkia tenebricolaTs
Description
This genus belongs to the family Kaelpiaceae, in the order Kaelpiales, however, their exact placement at the class-level within the phylum Omnitrophota is uncertain. As a monotypic genus, the description for the genus is the same as for the nomenclatural type, Saelkia tenebricola.
Classification
Incertae sedis (Bacteria) » “Kaelpiales” » “Kaelpiaceae” » Saelkia
References
Effective publication: Williams et al., 2021 [1]

Genus Gygaella

Etymology
[Gy.ga.el'la] N.L. fem. dim. n. Gygaella, named for Gygaea (Gr. Gugaia), lake nymph from Greek mythology
Nomenclatural type
Species Gygaella obscuraTs
Description
The genus belongs to the family Gygaellaceae, order Gygaellales, class Velamenicoccia, phylum Omnitrophota. The available genome assembly belonging to this family was recovered from Ace Lake, Antarctica. The nomenclatural type for the genus is the species Gygaella obscura.
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Gygaellales” » “Gygaellaceae” » Gygaella
References
Effective publication: Williams et al., 2021 [1]

Genus Kaelpia

Etymology
[Ka.el'pi.a] N.L. fem. n. Kaelpia, after kaelpie or kelpie, mythical water creature of Celtic folklore.
Nomenclatural type
Species Kaelpia aquaticaTs
Description
This genus belongs to the family Kaelpiaceae, in the order Kaelpiales, however, their exact placement at the class within the phylum Omnitrophota is uncertain. The genomes of both species belonging to this genus encode V-type ATPase and Rnf complex for ATP synthesis, and a Group A3 [FeFe] hydrogenase. The nomenclatural type for the genus is the species Kaelpia aquatica.
Classification
Incertae sedis (Bacteria) » “Kaelpiales” » “Kaelpiaceae” » Kaelpia
References
Effective publication: Williams et al., 2021 [1]

Genus Zapsychrus

Etymology
[Za.psy'chrus] Gr. pref. za-, intensifying prefix; Gr. adj. psychros, cold; N.L. masc. n. Zapsychrus, referring to an organism living in very cold conditions.
Nomenclatural type
Species Zapsychrus exiliTs
Description
This genus belongs to the family Zapsychraceae, order Zapsychrales, class Velaminicoccia, phylum Omnitrophota. Available cell size data indicate small cells for members of the genus. Large ORFs are common in the genus. Some components of the tight-adherence complex is encoded in these genomes as well as genes for respiratory pathways. Assemblies originate from wastewater, a bioreactor, soil and groundwater. Where reported, assemblies were recovered from samples taken at circumneutral or slightly basic pH, microaerobic conditions and between 10 °C and 30 °C. The nomenclatural type for the genus is the species Zapsychrus exilii.
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Zapsychraceae” » Zapsychrus
References
Effective publication: Williams et al., 2021 [1]

Species Aadella gelidaTs

Etymology
[ge.li'da] L. fem. adj. gelida, ice-cold; in reference to the very cold temperature of Ace Lake.
Nomenclatural type
NCBI Assembly: GCA_030765205.1 Ts
Description
This species is the type for the genus Aadella. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions designate this species as heterotrophic and capable of fermentation of glucose to acetyl-CoA through the EMP pathway. Proteases and peptidases for the degradation of proteins to amino acids is also encoded within the genome. Additionally, simple sugar transport and glycoside hydrolases are encoded by the genome and genes required for the synthesis of trehalose and glycogen are also present. The genome representative of this species encodes a V-type ATPase and an Rnf complex for ATP synthesis, and a Group 3b [NiFe] hydrogenase has been reported for this species. All components for a Type-4a pilus is encoded by the genome. The nomenclatural type for the species is the genome designated 3300035698_848.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Aadella » Aadella gelidaTs
References
Effective publication: Williams et al., 2021 [1]

Species Aceula lacicolaTs

Etymology
[la.ci'co.la] L. masc. n. lacus, lake; L. n. suff. -cola, from incola the inhabitant; N.L. fem. n. lacicola, lake-dweller
Nomenclatural type
NCBI Assembly: GCA_030765785.1 Ts
Description
This species is the type for the genus Aceula. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions designate this species as heterotrophic and capable of the fermentation of glucose to acetyl-CoA through EMP pathway. A reversible acetyl-CoA synthetase may be indicative of acetogenesis in this species. Proteases and peptidases for the degradation of proteins to amino acids is also encoded within the genome. Additionally, simple sugar transport and glycoside hydrolases are encoded by the genome and genes required for the synthesis of trehalose and glycogen is also present (Williams et al., 2021). The genome representative of this species encodes a V-type ATPase, respiratory F-type ATPase and Rnf complex for ATP synthesis, and a Group 3d [NiFe] hydrogenase (Williams et al., 2021). All genes required for the tight-adherence complex and the production of a Type-4a pilus is present in the genome of this species, as well as genes coding for a conductive pilin. The nomenclatural type for the species is the genome designated 3300035698_1100.
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Aceulaceae” » Aceula » Aceula lacicolaTs
References
Effective publication: Williams et al., 2021 [1]

Species Aceula meridiana

Etymology
[me.ri.di.a'na] L. fem. adj. meridiana, of or belonging to the south; in reference to the southern continent of Antarctica.
Nomenclatural type
NCBI Assembly: GCA_030765185.1 Ts
Description
This species belongs to the genus Aceula. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions indicate that this species is likely heterotrophic, with a horse-shoe type TCA cycle, and several proteases and peptidases, along with ABC sugar transporters and glycoside hydrolases are predicted for this species. Genes required for the synthesis of trehalose and glycogen is also present, and fermentation of glucose to acetyl-CoA through the EMP pathway is likely. A V-type ATPase, respiratory F-type ATPase and Rnf complex are encoded for ATP synthesis, while Group 3d [NiFe](Williams et al., 2021) and Group A3 [FeFe] hydrogenases are also encoded. Coupled with a reversible acetyl-CoA synthetase, acetogenesis is likely for this species. Genes required for the production of a Type-4a pilus and tight-adherence complex is encoded by the genome of this species. A very large ORF is present in this species. The type for this species is the genome designated 3300035698_985.
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Aceulaceae” » Aceula » Aceula meridiana
References
Effective publication: Williams et al., 2021 [1]

Species Gorgyraea atricolaTs

Etymology
[a.tri'co.la] L. masc. adj. ater, black, dark; L. n. suff. -cola, inhabitant; N.L. fem. n. atricola, inhabitant of the dark
Nomenclatural type
NCBI Assembly: GCA_030765235.1 Ts
Description
This species is the nomenclatural type for the genus Gorgyraea. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. The assembly representing this species has a genome of 1.74 Mb, with a %GC content of 41.71 %. This species encode for the Wood-Ljungdahl pathway, but the absence of genes for the reverse TCA cycle may indicate no capacity for autotrophic CO2 fixation and rather that the Wood-Ljungdahl pathway in combination with the Rnf complex, functions in the reductive direction as an electron sink during homoacetogenic glucose fermentation. Several proteases and peptidases are encoded for the degradation of proteins to amino acids, some with signal peptides, while simple sugar transporters and glycoside hydrolases are also encoded by the genome. The ability to synthesize trehalose and glycogen is also feasible. A V-type ATPase and Rnf complex for ATP synthesis is present and a membrane-bound Group 4g [NiFe] hydrogenase is also encoded. Components for a Type-4a pilus and a very large ORF is encoded by the genome. The nomenclatural type for this species is the genome designated 3300035698_32.
Classification
“Gorgyraeales” » “Gorgyraeaceae” » Gorgyraea » Gorgyraea atricolaTs
References
Effective publication: Williams et al., 2021 [1]

Species Gygaella obscuraTs

Etymology
[ob.scu'ra] L. fem. adj. obscura, dark, hidden; referring to life at the bottom of Ace Lake
Nomenclatural type
NCBI Assembly: GCA_030765485.1 Ts
Description
This species is the type for the genus Gygaella. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. The estimated genome size for this species is 1.96 Mb. This species is predicted to be heterotrophic with an incomplete horse-shoe type TCA cycle, and code for proteases, peptidases and glycoside hydrolases, with ABC transporters for simple sugars presents. Several genes associated with acetogenesis, along with a V-type ATPase, a respiratory F-type ATPase (complex V) and an Rnf complex is encoded, and a Group A3 [FeFe] hydrogenase is present. A conductive pilin is present in the genome of this species and all genes associated with the production of a Type-4a pilus and the tight-adherence complex is present in this species. The nomenclatural type for this species is the genome recovered from Ace Lake, Antarctica, 3300035698_1934. 
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Gygaellales” » “Gygaellaceae” » Gygaella » Gygaella obscuraTs
References
Effective publication: Williams et al., 2021 [1]

Species Kaelpia aquaticaTs

Etymology
[a.qua'ti.ca] L. fem. adj. aquatica, living or found in the water.
Nomenclatural type
NCBI Assembly: GCA_030765335.1 Ts
Description
This species is the nomenclatural type for the genus Kaelpia. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. This species is predicted to be heterotrophic, with a horse-shoe type TCA cycle, and encodes to proteases and peptidases to degrade proteins to amino acids. Simple sugar ABC transporters and glycoside hydrolases, along with the ability to synthesize trehalose and glycogen is predicted, and genes for the fermentation of glucose to acetyl-CoA through EMP pathway is present. A V-type ATPase and Rnf complex for ATP synthesis is present, and a Group A3 [FeFe] hydrogenase is encoded by this genome. The genome also encodes a conductive pilin and all genes associated with the production of a Type-4a pilus is present. The nomenclatural type for the species is the genome 3300035698_2000.
Classification
Incertae sedis (Bacteria) » “Kaelpiales” » “Kaelpiaceae” » Kaelpia » Kaelpia aquaticaTs
References
Effective publication: Williams et al., 2021 [1]

Species Kaelpia imicola

Etymology
[i.mi'co.la] L. masc. adj. imus, bottom; L. n. suff. -cola, inhabitant; N.L. fem. n. imicola, bottom-dweller
Nomenclatural type
NCBI Assembly: GCA_030765505.1 Ts
Description
This species belongs to the genus Kaelpia. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. This species is predicted to be heterotrophic. Fermentation of glucose to acetyl-CoA through EMP pathway is likely, and the genome encodes a V-type ATPase and Rnf complex for ATP synthesis, and a Group A3 [FeFe] hydrogenase. The genome also encodes a conductive pilin and genes for the production of a Type-4a pilus. The type for this species is the genome designated 3300035698_1655.
Classification
Incertae sedis (Bacteria) » “Kaelpiales” » “Kaelpiaceae” » Kaelpia » Kaelpia imicola
References
Effective publication: Williams et al., 2021 [1]

Species Saelkia tenebricolaTs

Etymology
[ten.e'bri.co.la] L. fem. n. tenebra, darkness; L. n. suff. -cola, inhabitant; N.L. fem. n. tenebricola, a dweller of the dark
Nomenclatural type
NCBI Assembly: GCA_030765145.1 Ts
Description
This species is the type for the genus Saelkia. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions indicate that this species is likely heterotrophic, with an incomplete horse-shoe type TCA cycle, fermentation of glucose to acetyl-CoA through the EMP pathway, and codes for proteases and peptidases to degrade proteins to amino acids, simple sugar ABC transporters and glycoside hydrolases. The genome also codes for a V-type ATPase and Rnf complex for ATP synthesis, and a Group 4g [NiFe] hydrogenase. All genes required for the production of a Type-4a pilus and conductive pili are encoded by the genome. The nomenclatural type for this species is the genome 3300035698_749.
Classification
Incertae sedis (Bacteria) » “Kaelpiales” » “Kaelpiaceae” » Saelkia » Saelkia tenebricolaTs
References
Effective publication: Williams et al., 2021 [1]

Species Tantalella remotaTs

Etymology
[re.mo'ta] L. fem. adj. remota, remote, distant; referencing the remoteness of the locality.
Nomenclatural type
NCBI Assembly: GCA_030765685.1 Ts
Description
This species is the nomenclatural type for the genus Tantalella. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Based on genome predictions, this species is heterotrophic and encodes several proteases and peptidases to degrade proteins to amino acids. Additionally, ABC transporters for transport of simple sugars and glycoside hydrolases are encoded by the genome, along with the ability to synthesize trehalose and glycogen. Fermentation of glucose to acetyl-CoA through the EMP pathway is likely. A V-type ATPase and an Rnf complex is encoded for ATP synthesis, and an incomplete horse-shoe type TCA cycle can be reconstructed from the genome. A Group 3b [NiFe] hydrogenase has been reported for this species. All components for a Type-4a pilus and a very large ORF are present in the genome. The nomenclatural type for the species is the genome designated 3300035698_1097.
Classification
Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Tantalella » Tantalella remotaTs
References
Effective publication: Williams et al., 2021 [1]

Species Zapsychrus exiliTs

Etymology
[ex.i'l.i] L. gen. n. exili, of an exile, refugee; referring to the isolation of Ace Lake, cut off from the Southern Ocean.
Nomenclatural type
NCBI Assembly: GCA_030765585.1 Ts
Description
This species is the nomenclatural type for the genus Zapsychrus. The estimated genome size is 2.1 Mb. Based on the description in Williams et al., 2021, an incomplete horse-shoe type TCA cycle is encoded by this genome, and this species is predicted to be heterotrophic. Glucose is predicted to be fermented through the EMP pathway. A Group 3d [NiFe] hydrogenase is predicted from the genome, and a V-type ATPase, respiratory F-type ATPase and Rnf complex for ATP synthesis is present. A reversible acetyl-CoA synthetase may be indicative of acetogenesis in this species. A conductive pilin is also encoded by the genome. All genes for a tight-adherence complex (Tad) and Type-4a pilus are present in the genome. The nomenclatural type for the species is the genome 3300035698_1555, recovered from metagenomic sampling and sequencing of Ace Lake, Antarctica. 
Classification
Bacteria » Omnitrophota » “Velamenicoccia” » “Zapsychrales” » “Zapsychraceae” » Zapsychrus » Zapsychrus exiliTs
References
Effective publication: Williams et al., 2021 [1]

References

  1. Williams et al. (2021). Shedding Light on Microbial “Dark Matter”: Insights Into Novel Cloacimonadota and Omnitrophota From an Antarctic Lake. Frontiers in Microbiology. DOI:10.3389/fmicb.2021.741077

Register List Certificate of Validation

On behalf of the Committee on the Systematics of Prokaryotes Described from Sequence Data (SeqCode Committee), we hereby certify that the Register List seqco.de/r:2rggbgyb submitted by Allen, Michelle and including 18 new names has been successfully validated.


Date of Priority: 2024-09-04 06:09 UTC
DOI: 10.57973/seqcode.r:2rggbgyb