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cognitis nomina
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Authors Ly

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Ly, Lynn


Publications
2

CitationNamesAbstract
Asgard archaea modulate potential methanogenesis substrates in wetland soil Valentin-Alvarado et al. (2024). Nature Communications 15 (1) Freyarchaeum deiterrae Ts Atabeyarchaeum deiterrae Ts Atabeyarchaeia Atabeyarchaeum Freyarchaeum Atabeyarchaeaceae Atabeyarchaeales Freyarchaeaceae Freyarchaeales Freyarchaeia
Asgard archaea modulate potential methanogenesis substrates in wetland soil Valentin-Alvarado et al. (2023). Atabeyarchaeaceae Atabeyarchaeales Freyarchaeaceae Freyarchaeum deiterrae Ts Atabeyarchaeum Freyarchaeales Freyarchaeum Freyarchaeia Atabeyarchaeum deiterrae Ts Asgardarchaeota Atabeyarchaeia

Asgard archaea modulate potential methanogenesis substrates in wetland soil
AbstractThe roles of Asgard archaea in eukaryogenesis and marine biogeochemical cycles are well studied, yet their contributions in soil ecosystems remain unknown. Of particular interest are Asgard archaeal contributions to methane cycling in wetland soils. To investigate this, we reconstructed two complete genomes for soil-associated Atabeyarchaeia, a new Asgard lineage, and a complete genome of Freyarchaeia, and predicted their metabolism in situ. Metatranscriptomics reveals expression of genes for [NiFe]-hydrogenases, pyruvate oxidation and carbon fixation via the Wood-Ljungdahl pathway. Also expressed are genes encoding enzymes for amino acid metabolism, anaerobic aldehyde oxidation, hydrogen peroxide detoxification and carbohydrate breakdown to acetate and formate. Overall, soil-associated Asgard archaea are predicted to include non-methanogenic acetogens, highlighting their potential role in carbon cycling in terrestrial environments.
Asgard archaea modulate potential methanogenesis substrates in wetland soil
AbstractThe roles of Asgard archaea in eukaryogenesis and marine biogeochemical cycles are well studied, yet their contributions in soil ecosystems are unknown. Of particular interest are Asgard archaeal contributions to methane cycling in wetland soils. To investigate this, we reconstructed two complete genomes for soil-associated Atabeyarchaeia, a new Asgard lineage, and the first complete genome of Freyarchaeia, and defined their metabolismin situ. Metatranscriptomics highlights high expression of [NiFe]-hydrogenases, pyruvate oxidation and carbon fixation via the Wood-Ljungdahl pathway genes. Also highly expressed are genes encoding enzymes for amino acid metabolism, anaerobic aldehyde oxidation, hydrogen peroxide detoxification and glycerol and carbohydrate breakdown to acetate and formate. Overall, soil-associated Asgard archaea are predicted to be non-methanogenic acetogens, likely impacting reservoirs of substrates for methane production in terrestrial ecosystems.One-Sentence SummaryComplete genomes of Asgard archaea, coupled with metatranscriptomic data, indicate roles in production and consumption of carbon compounds that are known to serve as substrates for methane production in wetlands.
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