SeqCode Registry
cognitis nomina
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Genomes
sc|0001006
JSON
Genome sc|0001006
Name
“Klebsiella quasiaerogenes”
Database
NCBI Assembly
Accession
GCA_032601995.1
Genomics
Accession
NCBI Assembly:
GCA_032601995.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
97.2%
Contamination:
1.9%
Quality:
87.7
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 71.0%)
2 23S rRNAs (up to 63.0%)
tRNAs for 21 amino acids
Sequencing depth
200.0 ×
Source
BioSample: SAMN32676451
Other features
G+C Content:
54.91%
Coding Density:
88.37%
Codon Table:
11
N50:
412,825 bp
Contigs:
63
Largest Contig:
621,016 bp
Assembly Length:
5,210,986 bp
Ambiguous Assembly Fraction:
0.0%
Submitter comments
we'd like to do the automated assessment for this genome
Automated checks
Complete
Last modified
22 days ago
Sample Metadata
BioSample entries
BioSample: SAMN32676451
Date
Collection Date:
2019-05-17
Location
Not detected
Toponym
Geo Loc Name:
China: Chengdu, Sichuan
Environment
Sample Type:
pure culture
Isolation Source:
ascites
Other
Host:
Homo sapiens
Package
Ncbi Submission Package:
Microbe.1.0
Biosamplemodel:
Microbe, viral or environmental
All retrieved samples
SAMN32676451
: The Microbe sample of Klebsiella quasiaerogenes strain 141153
Metadata retrieved
22 days ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN32676451
×
Metadata retrieved using the EBI API
BioSample Accession(s)
SAMN32676451, ERS16754551
strain
141153
collection_date
2019-05-17
NCBI submission package
Microbe.1.0
organism
Klebsiella sp. 141153
host
Homo sapiens
geo_loc_name
China: Chengdu, Sichuan
sample_type
pure culture
isolation_source
ascites
BioSampleModel
Microbe, viral or environmental
ENA-FIRST-PUBLIC
2023-10-14
ENA-LAST-UPDATE
2023-10-14
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