SeqCode Registry
cognitis nomina
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Genomes
sc|0001048
JSON
Genome sc|0001048
Database
NCBI Assembly
Accession
ASM214842v1
Genomics
Accession
NCBI Assembly:
ASM214842v1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
4.7%
Quality:
76.5
Ribosomal and transfer RNA genes
3 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
82.0 ×
Source
BioSample: SAMN04634065
Other features
G+C Content:
34.26%
Coding Density:
85.6%
Codon Table:
11
N50:
3,698,428 bp
Contigs:
8
Largest Contig:
3,698,428 bp
Assembly Length:
3,732,430 bp
Ambiguous Assembly Fraction:
5.66%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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