SeqCode Registry
cognitis nomina
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Genomes
sc|0000107
JSON
Genome sc|0000107
Database
NCBI Assembly
Accession
GCA_903841325.1
Genomics
Accession
NCBI Assembly:
GCA_903841325.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
100.0%
(automated estimate: 94.3%)
Contamination:
0.0%
(automated estimate: 0.0%)
Quality:
100.0
(automated estimate: 94.3)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
(automated estimate: 1)
1 23S rRNA (up to 100.0%)
(automated estimate: 0)
tRNAs for 19 amino acids
(automated estimate: 18)
Source
SRA: ERS4600352
Other features
G+C Content:
54.3%
(automated estimate: 54.3%)
Coding Density:
92.04%
Codon Table:
11
N50:
11,741 bp
Contigs:
251
Largest Contig:
61,352 bp
Assembly Length:
2,105,597 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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