Genome sc|0000110

Genomics

Accession

NCBI Assembly:JALGWK000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 89.01%
• Contamination: 6.59%
• Quality: 56.06

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 93.0%)
• 0 23S rRNAs
• tRNAs for 19 amino acids

Sequencing depth

28.0 ×

Source

• BioSample: SAMN17217427

Other features

• G+C Content: 61.38%
• Coding Density: 92.61%
• Codon Table: 11
• N50: 7,584 bp
• Contigs: 527
• Largest Contig: 40,220 bp
• Assembly Length: 3,088,548 bp
• Ambiguous Assembly Fraction: 0.0054%

Submitter comments

This is the best quality genome we could recover in this phylum. Completeness and contamination were estimated by checkm v1.0.5. rRNA were identified by barrnap v0.9. amino acid were translated from DNA sequence using prodigal v2.6.3. 

Automated checks

Complete

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Last modified 11 months ago