Genome sc|0000111

Genomics

Accession

NCBI Assembly:JALGYY000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.8%
• Contamination: 1.1%
• Quality: 92.3

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

37.5 ×

Source

• BioSample: SAMN26932584

Other features

• G+C Content: 57.33%
• Coding Density: 91.71%
• Codon Table: 11
• N50: 293,092 bp
• Contigs: 49
• Largest Contig: 996,856 bp
• Assembly Length: 4,880,233 bp
• Ambiguous Assembly Fraction: 0.00016%

Submitter comments

Completeness and contamination were estimated by checkm v1.0.5. rRNA were identified by barrnap v0.9. amino acid were translated from DNA sequence using prodigal v2.6.3. 

Automated checks

Complete

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Last modified 11 months ago