Genome sc|0000112

Genomics

Accession

NCBI Assembly:JALGZP000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.2%
• Contamination: 2.3%
• Quality: 80.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 26.0%)
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

14.0 ×

Source

• BioSample: SAMN20063066

Other features

• G+C Content: 55.8%
• Coding Density: 93.01%
• Codon Table: 11
• N50: 35,217 bp
• Contigs: 198
• Largest Contig: 109,640 bp
• Assembly Length: 3,316,924 bp
• Ambiguous Assembly Fraction: 0.00051%

Submitter comments

Completeness and contamination were estimated by checkm v1.0.5. rRNA were identified by barrnap v0.9. amino acid were translated from DNA sequence using prodigal v2.6.3. This is the best genome we can recover from this phylum

Automated checks

Complete

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Last modified 11 months ago