Genome sc|0000113

Genomics

Accession

NCBI Assembly:JALGZD000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.9%
• Contamination: 4.9%
• Quality: 74.4

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 86.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

16.0 ×

Source

• BioSample: SAMN26933180

Other features

• G+C Content: 59.28%
• Coding Density: 91.15%
• Codon Table: 11
• N50: 69,897 bp
• Contigs: 231
• Largest Contig: 281,204 bp
• Assembly Length: 2,910,771 bp
• Ambiguous Assembly Fraction: 0.0043%

Submitter comments

Completeness and contamination were estimated by checkm v1.0.5. rRNA were identified by barrnap v0.9. amino acid were translated from DNA sequence using prodigal v2.6.3. 

Automated checks

Complete

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Last modified 11 months ago