SeqCode Registry
cognitis nomina
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Genomes
sc|0000143
JSON
Genome sc|0000143
Database
NCBI Assembly
Accession
SHNN00000000
Genomics
Accession
NCBI Assembly:
SHNN00000000
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.9%
Quality:
95.5
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 21 amino acids
Sequencing depth
260.4 ×
Source
BioSample: SAMN10929371
Other features
G+C Content:
54.24%
Coding Density:
91.48%
Codon Table:
11
N50:
1,315,042 bp
Contigs:
20
Largest Contig:
1,895,525 bp
Assembly Length:
4,835,928 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
11 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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