Genome sc|0001509

Genomics

Accession

NCBI Assembly:JAZHEJ000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.69%
• Contamination: 0.0%
• Quality: 95.69

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

5.5 ×

Source

• BioSample: SAMN39583795

Other features

• G+C Content: 50.32%

Submitter comments

CheckM was employed to estimate genome completeness and contamination using the taxon-specific workflow.
The Integrated Microbial Genome (IMG) pipeline was used to determine number and type of RNA genes in assembly.

Automated checks

Failed: Cannot find ncbi:assembly:JAZHEJ000000000

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Last modified 11 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN39583795

Date

Collection Date: 2009-09-15

Location

Lat Lon: 33.991019 S 151.232503 E

Toponym

Geo Loc Name: Australia: NSW, Sydney, Bare Island

Environment

Isolation Source: MAG sequenced from bacterial pellet from marine sponge

Env Broad Scale: marine biome [ENVO:00000447]|marine benthic biome[ENVO:01000024]|marine subtidal rocky reef biome[ENVO:01000050]

Env Local Scale: coastal sea water[ENVO:00002150]

Env Medium: coastal sea water[ENVO:00002150]

Other

Not detected

Package

Ncbi Submission Package: MIMAG.symbiont-associated.6.0

Biosamplemodel: MIMAG.symbiont-associated

Additional Accessions

SAMN13301258 Append as BioSamples

All retrieved samples

• SAMN39583795: MIMAG Metagenome-assembled Genome sample of Candidatus Tethybacter castellensis

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Metadata retrieved 11 months ago