JSON

Genome sc|0001534

Name

“Fervidifonticultor septimus”

Database

NCBI Assembly

Accession

GCA_031459465.1

Genomics

Accession
NCBI Assembly:GCA_031459465.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 83.33%
  • Contamination: 2.61%
  • Quality: 70.28
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 1 23S rRNA (up to 37.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 69.96%
  • Coding Density: 92.45%
  • Codon Table: 11
  • N50: 33,539 bp
  • Contigs: 138
  • Largest Contig: 82,043 bp
  • Assembly Length: 3,128,332 bp
  • Ambiguous Assembly Fraction: 0.006%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-08
Location
Lat Lon: 25.44 N 98.46 E
Toponym
Geo Loc Name: China: Tengchong county, Yunnan, JZ-2 • China: Tengchong, Yunnan
Environment
Sample Type: metagenomic assembly
Isolation Source: Hot spring sediment • JZ-2
Env Broad Scale: Hot spring
Env Local Scale: Hot spring sediment
Env Medium: Hot spring sediment
Other
Depth: Surface
Package
Ncbi Submission Package: MIMAG.sediment.6.0 • Metagenome.environmental.1.0
Biosamplemodel: MIMAG.sediment • Metagenome or environmental
All retrieved samples
Metadata retrieved about 2 months ago


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