Genome sc|0001545

Genomics

Accession

NCBI Assembly:GCA_016714465.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.03%
• Contamination: 0.0%
• Quality: 91.03

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

9.0 ×

Source

• BioSample: SAMN16426371

Other features

• G+C Content: 64.67%
• Coding Density: 89.11%
• Codon Table: 11
• N50: 324,580 bp
• Contigs: 28
• Largest Contig: 561,833 bp
• Assembly Length: 4,628,329 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2018-08-29

Location

Lat Lon: 55.421534 N 10.366234 E

Toponym

Geo Loc Name: Denmark: Odense NW

Environment

Sample Type: metagenomic assembly

Isolation Source: activated sludge from OdNW_18-Q3-R42-56

Env Broad Scale: aquatic biome [ENVO:00002030]

Env Local Scale: Waste Water [ENVO:00002001]

Env Medium: Activated Sludge [ENVO:00002046]

Other

Not detected

Package

Ncbi Submission Package: MIMAG.wastewater.5.0

Biosamplemodel: MIMAG.wastewater

Additional Accessions

SAMN14825717

All retrieved samples

• SAMN16426371: MIMAG Metagenome-assembled Genome sample from Anaerolineae bacterium

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Metadata retrieved 4 months ago