Genome sc|0001571

Genomics

Accession

INSDC Nucleotide:BAABOD000000000.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 92.79%
• Contamination: 1.44%
• Quality: 85.59

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 99.0%)
• 1 23S rRNA (up to 99.0%)
• tRNAs for 16 amino acids

Sequencing depth

229.0 ×

Source

• SRA: SRR26984151

Other features

• G+C Content: 49.4%
• Coding Density: 90.7%
• Codon Table: 11
• N50: 29,822 bp
• Contigs: 100
• Largest Contig: 133,590 bp
• Assembly Length: 1,632,901 bp
• Ambiguous Assembly Fraction: 0.067%

Submitter comments

CheckM 

Automated checks

Complete

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Last modified 10 months ago

Sample Metadata

BioSample entries

• BioSample: SRS19672302

Date

Collection Date: 2021-04-21

Location

Lat Lon: 3.359889 N 76.638565 W

Toponym

Geo Loc Name: Colombia: Valle del Cauca, Cali

Environment

Isolation Source: sewage sludge from municipal wastewater treatment plant

Env Broad Scale: ENVO:00002001

Env Local Scale: ENVO:0010001

Env Medium: ENVO:00002129

Other

Not detected

Package

Ncbi Submission Package: MIMAG.wastewater.6.0

Biosamplemodel: MIMAG.wastewater

All retrieved samples

• SRS19672302: MIMAG Metagenome-assembled Genome sample from Anaerolineaceae

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Metadata retrieved 10 months ago