SeqCode Registry
cognitis nomina
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Genomes
sc|0001579
JSON
Genome sc|0001579
Database
NCBI Assembly
Accession
SAMEA5406578
Genomics
Accession
NCBI Assembly:
SAMEA5406578
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.2%
Contamination:
0.0%
Quality:
94.2
Ribosomal and transfer RNA genes
3 16S rRNAs (unknown length)
Source
SRA: SAMEA5406578
Other features
G+C Content:
42.6%
Submitter comments
The GC content was assessed using anvio-8
Completeness and redundancy values were determined using checkM v1.1.3
The presence of tRNA elements was assessed using prokka v1.14.6
The presence of rRNA fragments was assessed using prokka v1.14.6 and barrnap v0.9
Automated checks
Failed: Cannot find ncbi:assembly:SAMEA5406578
Last modified
10 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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