JSON

Genome sc|0001591

Name

“Shikimatogenerans throscidiphilus”

Database

INSDC Nucleotide

Accession

CP146597.1

Genomics

Accession
INSDC Nucleotide:CP146597.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 18 amino acids
Sequencing depth
45.0 ×
Source
Other features
  • G+C Content: 12.1%
  • Coding Density: 87.61%
  • Codon Table: 11
  • N50: 161,204 bp
  • Contigs: 1
  • Largest Contig: 161,204 bp
  • Assembly Length: 161,204 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 9 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017-12-08
Location
Lat Lon: 39.9526 N 75.1652 W
Toponym
Geo Loc Name: USA: Philadelphia, Pennsylvania
Environment
Isolation Source: human endotracheal aspirate
Other
Host: Homo sapiens
Package
All retrieved samples
Metadata retrieved 9 months ago


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