Genome sc|0001606


Database

NCBI Assembly

Accession

GCA_037465765.1

Genomics

Accession
NCBI Assembly:GCA_037465765.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.76%
  • Contamination: 0.67%
  • Quality: 94.41
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 16 amino acids
Sequencing depth
97.76 ×
Source
Other features
  • G+C Content: 42.0%
  • Coding Density: 88.45%
  • Codon Table: 11
  • N50: 31,772 bp
  • Contigs: 113
  • Largest Contig: 87,224 bp
  • Assembly Length: 2,365,658 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-04-29 • 2008/2010
Location
Lat Lon: 56.2639 N 9.5018 E
Geographic Location Latitude: 55.676097
Geographic Location Longitude: 12.568337
Toponym
Geo Loc Name: Denmark
Environment
Sample Type: metagenomic assembly
Isolation Source: feces
Environment Biome: human gut
Environment Feature: human-associated habitat
Other
Host: Homo sapiens
Package
Ena Checklist: ERC000015
Ncbi Submission Package: MIMAG.6.0
Biosamplemodel: MIMAG
Additional Accessions
ERR414243
All retrieved samples

Metadata retrieved about 1 month ago

Sequencing Experiments

Illumina HiSeq 2000 paired end sequencing
Illumina HiSeq 2000 sequencing


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