JSON

Genome sc|0001646

Name

“Accumulibacter meliphilus”

Database

NCBI Assembly

Accession

GCA_003332265.1

Genomics

Accession
NCBI Assembly:GCA_003332265.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.24%
  • Contamination: 0.7%
  • Quality: 91.74
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Sequencing depth
16.0 ×
Source
Other features
  • G+C Content: 62.48%
  • Coding Density: 88.49%
  • Codon Table: 11
  • N50: 85,321 bp
  • Contigs: 120
  • Largest Contig: 441,828 bp
  • Assembly Length: 4,701,482 bp
  • Ambiguous Assembly Fraction: 1.23%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2014-06-25
Location
Lat Lon: 43.07 N 89.40 W
Toponym
Geo Loc Name: USA: Wisconsin
Environment
Sample Type: metagenomic assembly
Isolation Source: activated sludge
Other
Not detected
Package
Ncbi Package: Microbe.1.0
All retrieved samples
Metadata retrieved 3 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license