JSON

Genome sc|0001650

Name

“Accumulibacter vicinus”

Database

NCBI Assembly

Accession

GCA_002425405.1

Genomics

Accession
NCBI Assembly:GCA_002425405.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.65%
  • Contamination: 0.24%
  • Quality: 92.45
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Sequencing depth
71.8 ×
Source
Other features
  • G+C Content: 61.98%
  • Coding Density: 90.26%
  • Codon Table: 11
  • N50: 30,772 bp
  • Contigs: 204
  • Largest Contig: 100,621 bp
  • Assembly Length: 4,283,242 bp
  • Ambiguous Assembly Fraction: 0.9%
Automated checks
Complete
Last modified 9 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Sample Type: metagenomic assembly
Isolation Source: EBPR metagenome enriched with CAPIIC
Other
Not detected
Package
Ncbi Package: Microbe.1.0
All retrieved samples
Metadata retrieved 9 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license