JSON

Genome sc|0001651

Name

“Accumulibacter cognatus”

Database

NCBI Assembly

Accession

GCA_013414765.1

Genomics

Accession
NCBI Assembly:GCA_013414765.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.05%
  • Contamination: 1.11%
  • Quality: 93.5
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
400.0 ×
Source
Other features
  • G+C Content: 61.36%
  • Coding Density: 89.18%
  • Codon Table: 11
  • N50: 5,169,514 bp
  • Contigs: 1
  • Largest Contig: 5,169,514 bp
  • Assembly Length: 5,169,514 bp
  • Ambiguous Assembly Fraction: 0.0029%
Automated checks
Complete
Last modified 9 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-05-15
Location
Lat Lon: 1.344722 N 103.681389 E
Toponym
Geo Loc Name: Singapore: Jurong West
Environment
Isolation Source: activated sludge
Env Broad Scale: continuous culture bioreactor
Env Local Scale: suspended biomass
Env Medium: suspended biomass
Other
Not detected
Package
Ncbi Package: MIMAG.wastewater.6.0
Additional Accessions
This biosample is a metagenomic assembly obtained from the bioreactor metagenome sample SAMN10587722
All retrieved samples
Metadata retrieved 9 months ago


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