JSON

Genome sc|0001654

Name

“Accumulibacter necessarius”

Database

NCBI Assembly

Accession

GCA_017302435.1

Genomics

Accession
NCBI Assembly:GCA_017302435.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 0.98%
  • Quality: 93.2
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
2.0 ×
Source
Other features
  • G+C Content: 62.72%
  • Coding Density: 88.67%
  • Codon Table: 11
  • N50: 83,370 bp
  • Contigs: 88
  • Largest Contig: 231,847 bp
  • Assembly Length: 4,564,207 bp
  • Ambiguous Assembly Fraction: 0.0046%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Lat Lon: 43.071 N 89.401 W
Toponym
Geo Loc Name: USA:WI
Environment
Sample Type: metagenomic assembly
Isolation Source: activated sludge
Env Broad Scale: wastewater
Env Local Scale: bioreactor
Env Medium: synthetic media
Other
Not detected
Package
Ncbi Package: MIMAG.wastewater.6.0
Additional Accessions
SAMN18059819, SAMN18059820, SAMN18059821
All retrieved samples
Metadata retrieved 3 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license