JSON

Genome sc|0001675

Name

“Methanobrevibacter intestini”

Database

INSDC Nucleotide

Accession

CP081485.1

Genomics

Accession
INSDC Nucleotide:CP081485.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
208.0 ×
Source
Other features
  • G+C Content: 30.35%
  • Coding Density: 90.05%
  • Codon Table: 11
  • N50: 1,951,395 bp
  • Contigs: 1
  • Largest Contig: 1,951,395 bp
  • Assembly Length: 1,951,395 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 8 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-06-25
Location
Lat Lon: 1.31466 N 103.84540 E
Toponym
Geo Loc Name: Singapore
Environment
Isolation Source: Human fecal sample
Env Broad Scale: human gut biome
Env Local Scale: feces
Env Medium: fecal sample
Other
Host: Homo sapiens
Package
Ncbi Package: MIGS.ba.human-gut.6.0
All retrieved samples
Metadata retrieved 8 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license