Genome sc|0001688

Genomics

Accession

NCBI Assembly:NZ_CP130558

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 4.86%
• Quality: 75.7

Ribosomal and transfer RNA genes

• 5 16S rRNAs (unknown length)
• 5 23S rRNAs (unknown length)

Sequencing depth

100.0 ×

Source

• BioSample: SAMN36429468

Other features

• G+C Content: 33.82%

Submitter comments

The completeness and G+C content of the genome was estimated by using the gVolante online tool with program BUSCO (v5) and ortholog set Thermoanaerobacterales. The contamination and number of 16S and 23 rRNA genes were estimated by the NCBI Refseq.

Automated checks

Failed: Cannot find ncbi:assembly:NZ_CP130558

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Last modified 8 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN36429468

Date

Collection Date: 2017-06-06

Location

Lat Lon: 17.238996 N 73.551293 E

Toponym

Geo Loc Name: India: Maharashtra

Environment

Isolation Source: Hot spring sediment

Env Broad Scale: no data

Env Local Scale: no data

Env Medium: no data

Other

Depth: no data

Package

Ncbi Package: MIGS.ba.sediment.6.0

All retrieved samples

• SAMN36429468: MIGS Cultured Bacterial/Archaeal sample from Thermoanaerobacterium sp. CMT5567-10

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Metadata retrieved 8 months ago