Genome sc|0001689

Genomics

Accession

NCBI Assembly:NZ_CP130558.2

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 4.86%
• Quality: 75.7

Ribosomal and transfer RNA genes

• 5 16S rRNAs (up to 100.0%)
• 5 23S rRNAs (up to 100.0%)

Sequencing depth

100.0 ×

Source

• BioSample: SAMN36429468

Other features

• G+C Content: 33.82%

Submitter comments

The completeness and G+C content of the genome was estimated by gVolante online tool with program BUSCO (v5) and ortholog set Thermoanaerobacterales. The contamination of genome and 16S and 23S rRNA gene numbers were estimated by the NCBI Refseq.

Automated checks

Failed: Cannot find ncbi:assembly:NZ_CP130558.2

Sample Metadata

Date

Collection Date: 2017-06-06

Location

Lat Lon: 17.238996 N 73.551293 E

Toponym

Geo Loc Name: India: Maharashtra

Environment

Isolation Source: Hot spring sediment

Env Broad Scale: no data

Env Local Scale: no data

Env Medium: no data

Other

Depth: no data

Package

Ncbi Package: MIGS.ba.sediment.6.0

All retrieved samples

• SAMN36429468: MIGS Cultured Bacterial/Archaeal sample from Thermoanaerobacterium sp. CMT5567-10

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Metadata retrieved 2 months ago