JSON

Genome sc|0001699

Name

“Thermoanaerobacterium cellulosifermentans”

Database

NCBI Assembly

Accession

GCF_030534315.2

Genomics

Accession
NCBI Assembly:GCF_030534315.2
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 4.86%
  • Quality: 75.7
Ribosomal and transfer RNA genes
  • 5 16S rRNAs (up to 100.0%)
  • 5 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 34.0%
  • Coding Density: 87.67%
  • Codon Table: 11
  • N50: 3,019,811 bp
  • Contigs: 1
  • Largest Contig: 3,019,811 bp
  • Assembly Length: 3,019,811 bp
  • Ambiguous Assembly Fraction: 0.0033%
Submitter comments
The G+C content (%), completeness, contamination, 16S rRNA and 23S rRNA gene fragments were determined using NCBI RefSeq.
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2017-06-06
Location
Lat Lon: 17.238996 N 73.551293 E
Toponym
Geo Loc Name: India: Maharashtra
Environment
Isolation Source: Hot spring sediment
Env Broad Scale: no data
Env Local Scale: no data
Env Medium: no data
Other
Depth: no data
Package
Ncbi Submission Package: MIGS.ba.sediment.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.sediment
All retrieved samples
Metadata retrieved 2 months ago


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