JSON

Genome sc|0001708

Database

NCBI Assembly

Accession

GCA_011375275.1

Genomics

Accession
NCBI Assembly:GCA_011375275.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 84.68% (automated estimate: 86.8%)
  • Contamination: 2.85% (automated estimate: 0.9%)
  • Quality: 70.43 (automated estimate: 82.3)
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 62.0%) (automated estimate: 1)
  • 0 23S rRNAs (automated estimate: 0)
  • tRNAs for 26 amino acids (automated estimate: 15)
Sequencing depth
16.6 ×
Source
Other features
  • G+C Content: 54.84% (automated estimate: 54.84%)
  • Coding Density: 83.41%
  • Codon Table: 11
  • N50: 5,821 bp
  • Contigs: 747
  • Largest Contig: 31,384 bp
  • Assembly Length: 4,028,935 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 7 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license