SeqCode Registry
cognitis nomina
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Genomes
sc|0001720
JSON
Genome sc|0001720
Name
“Hydrothermomicrobium primum”
Database
NCBI Assembly
Accession
GCA_011682565.1
Genomics
Accession
NCBI Assembly:
GCA_011682565.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
81.22%
Contamination:
4.4%
Quality:
59.22
Ribosomal and transfer RNA genes
0 16S rRNAs
1 23S rRNA (up to 33.0%)
tRNAs for 36 amino acids
Sequencing depth
3.0 ×
Source
BioSample: SAMN13826939
Other features
G+C Content:
44.39%
Coding Density:
89.69%
Codon Table:
11
N50:
6,539 bp
Contigs:
754
Largest Contig:
33,870 bp
Assembly Length:
4,373,136 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
8 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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