JSON

Genome sc|0001735

Database

NCBI Assembly

Accession

GCA_016783825.1

Genomics

Accession
NCBI Assembly:GCA_016783825.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 84.55% (automated estimate: 88.7%)
  • Contamination: 4.4% (automated estimate: 1.9%)
  • Quality: 62.55 (automated estimate: 79.2)
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%) (automated estimate: 1)
  • 1 23S rRNA (up to 100.0%) (automated estimate: 1)
  • tRNAs for 37 amino acids (automated estimate: 18)
Sequencing depth
50.0 ×
Source
Other features
  • G+C Content: 37.25% (automated estimate: 37.25%)
  • Coding Density: 83.43%
  • Codon Table: 11
  • N50: 23,462 bp
  • Contigs: 260
  • Largest Contig: 80,480 bp
  • Assembly Length: 4,536,896 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 8 months ago


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