JSON

Genome sc|0001738

Database

NCBI Assembly

Accession

GCA_016926625.1

Genomics

Accession
NCBI Assembly:GCA_016926625.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 87.85% (automated estimate: 91.5%)
  • Contamination: 2.2% (automated estimate: 1.9%)
  • Quality: 76.85 (automated estimate: 82.0)
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 46.0%) (automated estimate: 1)
  • 0 23S rRNAs (automated estimate: 0)
  • tRNAs for 39 amino acids (automated estimate: 19)
Sequencing depth
25.7 ×
Source
Other features
  • G+C Content: 44.37% (automated estimate: 44.37%)
  • Coding Density: 88.89%
  • Codon Table: 11
  • N50: 45,194 bp
  • Contigs: 134
  • Largest Contig: 164,990 bp
  • Assembly Length: 3,611,166 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 8 months ago


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