Genome sc|0001815

Genomics

Accession

NCBI Assembly:GCA_021731865.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 89.6%
• Contamination: 0.9%
• Quality: 85.1

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

640.0 ×

Source

• BioSample: SAMN14080594
• BioSample: SAMN14080273

Other features

• G+C Content: 60.99%
• Coding Density: 91.46%
• Codon Table: 11
• N50: 110,726 bp
• Contigs: 45
• Largest Contig: 286,273 bp
• Assembly Length: 2,984,991 bp
• Ambiguous Assembly Fraction: 0.0039%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2015-08-01

Location

Lat Lon: 51.30 N 0.7 W

Toponym

Geo Loc Name: United Kingdom

Environment

Sample Type: metagenomic assembly

Isolation Source: chlorinated drinking water, site 6

Env Broad Scale: ENVO:00002030

Env Local Scale: not applicable

Env Medium: ENVO:00003064

Other

Depth: not applicable

Package

Ncbi Submission Package: MIMAG.water.6.0 • MIMS.me.water.6.0

Biosamplemodel: MIMAG.water • MIGS/MIMS/MIMARKS.water

All retrieved samples

• SAMN14080594: MIMAG Metagenome-assembled Genome sample from Hyphomicrobiales bacterium
• SAMN14080273: Chlorinated drinking water, Site 6

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Metadata retrieved 17 days ago