SeqCode Registry
cognitis nomina
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Genomes
sc|0001866
JSON
Genome sc|0001866
Database
NCBI Assembly
Accession
GCA_012728195.1
Genomics
Accession
NCBI Assembly:
GCA_012728195.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
100.0%
(automated estimate: 99.1%)
Contamination:
0.0%
(automated estimate: 1.9%)
Quality:
100.0
(automated estimate: 89.6)
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 16 amino acids
Sequencing depth
100.0 ×
Source
SRA: SAMN13893765
Other features
G+C Content:
41.71%
(automated estimate: 41.71%)
Coding Density:
86.7%
Codon Table:
11
N50:
17,091 bp
Contigs:
226
Largest Contig:
100,333 bp
Assembly Length:
2,138,796 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
7 months ago
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
No BioSample metadata was found associated to this genome.
Metadata retrieved
7 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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