SeqCode Registry
cognitis nomina
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Genomes
sc|0001875
JSON
Genome sc|0001875
Name
“Atribacter hydrocarboniphilus”
Database
NCBI Assembly
Accession
GCA_003542295.1
Genomics
Accession
NCBI Assembly:
GCA_003542295.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
88.06%
Contamination:
0.0%
Quality:
88.06
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 16 amino acids
Sequencing depth
100.0 ×
Source
SRA: SAMN08019887
Other features
G+C Content:
38.75%
Coding Density:
87.25%
Codon Table:
11
N50:
8,564 bp
Contigs:
307
Largest Contig:
29,817 bp
Assembly Length:
2,129,445 bp
Ambiguous Assembly Fraction:
0.28%
Automated checks
Complete
Last modified
7 months ago
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
No BioSample metadata was found associated to this genome.
Metadata retrieved
7 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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