JSON

Genome sc|0001880

Name

“Sediminicultor quartus”

Database

NCBI Assembly

Accession

GCA_011056645.1

Genomics

Accession
NCBI Assembly:GCA_011056645.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.54%
  • Contamination: 0.0%
  • Quality: 92.54
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 62.0%)
  • 0 23S rRNAs
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 35.13%
  • Coding Density: 86.78%
  • Codon Table: 11
  • N50: 14,846 bp
  • Contigs: 231
  • Largest Contig: 74,713 bp
  • Assembly Length: 2,254,528 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2013-12-03
Location
Lat Lon: 34.9956 N 98.6889 W
Toponym
Geo Loc Name: USA: Zodletone Spring, Oklahoma
Environment
Sample Type: metagenomic assembly
Isolation Source: hot spring sediment
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved about 2 months ago


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