JSON

Genome sc|0001884

Name

“Infernicultor aquiphilus”

Database

NCBI Assembly

Accession

GCA_001873345.1

Genomics

Accession
NCBI Assembly:GCA_001873345.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.03%
  • Contamination: 0.15%
  • Quality: 91.28
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 33.45%
  • Coding Density: 86.18%
  • Codon Table: 11
  • N50: 13,918 bp
  • Contigs: 152
  • Largest Contig: 42,882 bp
  • Assembly Length: 1,594,034 bp
  • Ambiguous Assembly Fraction: 0.051%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2009-11-08
Location
Lat Lon: 38.56 N 110.8 W
Toponym
Geo Loc Name: USA: Crystal Geyser near Green River, Utah
Environment
Isolation Source: groundwater filtered through a 3.0 um filter
Other
Not detected
Package
Ncbi Submission Package: Metagenome.environmental.1.0
Biosamplemodel: Metagenome or environmental
All retrieved samples
Metadata retrieved about 2 months ago


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