JSON

Genome sc|0001892

Name

“Coneutiohabitans thermophilus”

Database

NCBI Assembly

Accession

GCA_034505235.1

Genomics

Accession
NCBI Assembly:GCA_034505235.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.44%
  • Contamination: 1.16%
  • Quality: 88.64
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 73.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 46 amino acids
Sequencing depth
9.0 ×
Source
Other features
  • G+C Content: 57.22%
  • Coding Density: 85.25%
  • Codon Table: 11
  • N50: 31,471 bp
  • Contigs: 254
  • Largest Contig: 116,759 bp
  • Assembly Length: 5,589,360 bp
  • Ambiguous Assembly Fraction: 0.0048%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-03
Location
Lat Lon: 24.95102 N 98.43613 E
Toponym
Geo Loc Name: China: Tengchong, Zhenzhu hot spring
Environment
Sample Type: metagenomic assembly
Isolation Source: hot spring sediment
Env Broad Scale: Hydrothermal system
Env Local Scale: Hot spring
Env Medium: Hot spring sediment
Other
Not detected
Package
Ncbi Submission Package: MIMAG.sediment.6.0
Biosamplemodel: MIMAG.sediment
Additional Accessions
SAMN27648497
All retrieved samples
Metadata retrieved about 1 month ago


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