SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0001899
JSON
Genome sc|0001899
Name
“Flaviator mogontiacumensis”
Database
INSDC Nucleotide
Accession
CP157202
Genomics
Accession
INSDC Nucleotide:
CP157202
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.0%
Quality:
100.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
800.0 ×
Source
SRA: SRX23685892
Other features
G+C Content:
38.6%
Coding Density:
60.43%
Codon Table:
11
N50:
1,595,116 bp
Contigs:
1
Largest Contig:
1,595,116 bp
Assembly Length:
1,595,116 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2018
Location
Lat Lon:
49.993330 N 8.243941 E
Toponym
Geo Loc Name:
Germany
Environment
Not detected
Other
Host:
Aulonothroscus brevicollis
Package
Ncbi Submission Package:
Metagenome.environmental.1.0
Biosamplemodel:
Metagenome or environmental
All retrieved samples
SRS20517505
: Metagenome or environmental sample from insect metagenome
Metadata retrieved
22 days ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SRS20517505
×
Retrieved via SRX23685892
Abre
collection_date
2018
INSDC secondary accession
SRS20517505
NCBI submission package
Metagenome.environmental.1.0
organism
insect metagenome
host
Aulonothroscus brevicollis
geo_loc_name
Germany
lat_lon
49.993330 N 8.243941 E
BioSampleModel
Metagenome or environmental
ENA-FIRST-PUBLIC
2024-02-21
ENA-LAST-UPDATE
2024-02-21
Search
×
Names
Publications
Authors
Subjects