SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0001936
JSON
Genome sc|0001936
Database
INSDC Nucleotide
Accession
JBDRVN000000000
Genomics
Accession
INSDC Nucleotide:
JBDRVN000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
85.39%
(automated estimate: 89.6%)
Contamination:
1.12%
(automated estimate: 0.9%)
Quality:
79.79
(automated estimate: 85.1)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
7.256 ×
Source
BioSample: SAMN40924722
Other features
G+C Content:
30.87%
(automated estimate: 30.87%)
Coding Density:
94.69%
Codon Table:
11
N50:
29,098 bp
Contigs:
70
Largest Contig:
73,715 bp
Assembly Length:
1,555,453 bp
Ambiguous Assembly Fraction:
0.0028%
Automated checks
Complete
Last modified
6 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
Search
×
Names
Publications
Authors
Subjects