SeqCode Registry
cognitis nomina
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Genomes
sc|0001951
JSON
Genome sc|0001951
Database
INSDC Nucleotide
Accession
JBDRUF000000000
Genomics
Accession
INSDC Nucleotide:
JBDRUF000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
96.63%
(automated estimate: 91.5%)
Contamination:
0.19%
(automated estimate: 1.9%)
Quality:
95.68
(automated estimate: 82.0)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 21 amino acids
Sequencing depth
11.021 ×
Source
BioSample: SAMN40924756
Other features
G+C Content:
50.25%
(automated estimate: 50.25%)
Coding Density:
93.29%
Codon Table:
11
N50:
32,703 bp
Contigs:
70
Largest Contig:
78,898 bp
Assembly Length:
1,697,219 bp
Ambiguous Assembly Fraction:
0.0024%
Automated checks
Complete
Last modified
6 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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