SeqCode Registry
cognitis nomina
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Genomes
sc|0001970
JSON
Genome sc|0001970
Database
INSDC Nucleotide
Accession
JBDRYZ000000000
Genomics
Accession
INSDC Nucleotide:
JBDRYZ000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
89.83%
(automated estimate: 90.6%)
Contamination:
0.0%
(automated estimate: 1.9%)
Quality:
89.83
(automated estimate: 81.1)
Ribosomal and transfer RNA genes
0 16S rRNAs
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
233.364 ×
Source
BioSample: SAMN40924632
Other features
G+C Content:
29.42%
(automated estimate: 29.36%)
Coding Density:
96.93%
Codon Table:
11
N50:
31,023 bp
Contigs:
66
Largest Contig:
88,553 bp
Assembly Length:
1,663,251 bp
Ambiguous Assembly Fraction:
0.2%
Automated checks
Complete
Last modified
6 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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