SeqCode Registry
cognitis nomina
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Genomes
sc|0001981
JSON
Genome sc|0001981
Database
INSDC Nucleotide
Accession
JBDRXT000000000
Genomics
Accession
INSDC Nucleotide:
JBDRXT000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
87.29%
(automated estimate: 83.0%)
Contamination:
0.15%
(automated estimate: 1.9%)
Quality:
86.54
(automated estimate: 73.5)
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 18 amino acids
Sequencing depth
35.601 ×
Source
BioSample: SAMN40924664
Other features
G+C Content:
28.39%
(automated estimate: 28.39%)
Coding Density:
97.48%
Codon Table:
11
N50:
14,750 bp
Contigs:
125
Largest Contig:
35,377 bp
Assembly Length:
1,204,320 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
6 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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