Genome sc|0002010

Database

NCBI Assembly

Accession

JAFGSQ01

Genomics

Accession

NCBI Assembly:JAFGSQ01

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 94.14%
Contamination: 3.3%
Quality: 77.64

Sequencing depth

17.0 ×

Source

BioSample: SAMN17243384

Other features

G+C Content: 43.38%

Automated checks

Failed: Cannot find ncbi:assembly:JAFGSQ01

Sample Metadata

Date

Collection Date: 2017-09

Location

Lat Lon: 34.99562 N 98.68895 W

Toponym

Geo Loc Name: USA: Anadarko, OK, Zodletone Spring

Environment

Sample Type: metagenomic assembly

Isolation Source: freshwater sediment

Env Broad Scale: Freshwater sediment biome

Env Local Scale: sediment

Env Medium: sediment

Other

Depth: 1m

Package

Ncbi Submission Package: MIMAG.sediment.5.0

Biosamplemodel: MIMAG.sediment

Additional Accessions

SAMN17269717 Append as BioSamples

All retrieved samples

SAMN17243384: MIMAG Metagenome-assembled Genome sample from candidate division WOR-3 bacterium

Metadata retrieved 10 days ago

© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license