JSON

Genome sc|0002014

Database

NCBI Assembly

Accession

JACQXS01

Genomics

Accession
NCBI Assembly:JACQXS01
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 86.92%
  • Contamination: 1.1%
  • Quality: 81.42
Sequencing depth
37.7 ×
Source
Automated checks
Failed: Cannot find ncbi:assembly:JACQXS01

Sample Metadata

Date
Collection Date: 2018-09-08
Location
Lat Lon: 38.69129 N 122.54441 W
Toponym
Geo Loc Name: USA: California, Middletown
Environment
Sample Type: metagenomic assembly
Isolation Source: groundwater
Env Broad Scale: groundwater planktonic microbiome
Env Local Scale: not applicable
Env Medium: not applicable
Other
Depth: <100 m
Package
Ncbi Submission Package: MIMAG.water.5.0
Biosamplemodel: MIMAG.water
Additional Accessions
SAMN15459609 Append as BioSamples
All retrieved samples
Metadata retrieved 10 days ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license