Genome sc|0000213


Database

NCBI Assembly

Accession

GCA_019118525.1

Genomics

Accession
NCBI Assembly:GCA_019118525.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.03%
  • Contamination: 0.88%
  • Quality: 89.63
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Source
Other features
  • G+C Content: 51.35%
  • Coding Density: 91.07%
  • Codon Table: 11
  • N50: 67,718 bp
  • Contigs: 75
  • Largest Contig: 168,605 bp
  • Assembly Length: 2,554,324 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015-07-13
Location
Lat Lon: 38.98 N 76.94 W
Toponym
Geo Loc Name: USA
Environment
Sample Type: metagenomic assembly
Isolation Source: groupA replicate 1
Other
Host: Gallus gallus • Chicken
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR5280289
All retrieved samples

Metadata retrieved 11 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license