SeqCode Registry
cognitis nomina
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Genomes
sc|0002243
JSON
Genome sc|0002243
Name
“Blautia caccae”
Database
NCBI Assembly
Accession
GCA_040095955.1
Genomics
Accession
NCBI Assembly:
GCA_040095955.1
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.73%
Contamination:
0.63%
Quality:
95.58
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
4 23S rRNAs (up to 31.0%)
tRNAs for 20 amino acids
Sequencing depth
121.0 ×
Source
BioSample: SAMN40466822
Other features
G+C Content:
46.73%
Coding Density:
89.33%
Codon Table:
11
N50:
239,989 bp
Contigs:
117
Largest Contig:
431,605 bp
Assembly Length:
5,827,087 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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