SeqCode Registry
cognitis nomina
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Genomes
sc|0002279
JSON
Genome sc|0002279
Database
NCBI Assembly
Accession
GCA_004375895.1
Genomics
Accession
NCBI Assembly:
GCA_004375895.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.61%
(automated estimate: 89.6%)
Contamination:
0.0%
(automated estimate: 1.9%)
Quality:
94.61
(automated estimate: 80.1)
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 60.0%)
1 23S rRNA (up to 49.0%)
tRNAs for 19 amino acids
Sequencing depth
10.0 ×
Source
BioSample: SAMN11124411
Other features
G+C Content:
52.87%
Coding Density:
88.53%
Codon Table:
11
N50:
54,834 bp
Contigs:
75
Largest Contig:
130,916 bp
Assembly Length:
2,195,223 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
6 months ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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