Genome sc|0002284

Genomics

Accession

NCBI Assembly:GCA_011052815.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.94% (automated estimate: 95.3%)
• Contamination: 1.12% (automated estimate: 1.9%)
• Quality: 89.34 (automated estimate: 85.8)

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

10.0 ×

Source

• BioSample: SAMN09638581

Other features

• G+C Content: 44.27%
• Coding Density: 93.44%
• Codon Table: 11
• N50: 30,108 bp
• Contigs: 111
• Largest Contig: 83,793 bp
• Assembly Length: 2,385,744 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 6 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN09638581

Date

Collection Date: 2009-12

Location

Lat Lon: 27.100437 N 111.124548 W

Toponym

Geo Loc Name: Mexico: Guaymas Basin, Gulf of California

Environment

Sample Type: metagenomic assembly

Isolation Source: hydrothermal sediments

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN09638581: Microbe sample from candidate division WOR-3 bacterium

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Metadata retrieved 6 months ago