Genome sc|0002289

Genomics

Accession

NCBI Assembly:GCA_002347155.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.41% (automated estimate: 89.6%)
• Contamination: 1.1% (automated estimate: 0.9%)
• Quality: 88.91 (automated estimate: 85.1)

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 45.0%)
• 1 23S rRNA (up to 52.0%)
• tRNAs for 21 amino acids

Sequencing depth

28.7 ×

Source

• BioSample: SAMN06453496

Other features

• G+C Content: 62.61%
• Coding Density: 86.44%
• Codon Table: 11
• N50: 49,028 bp
• Contigs: 131
• Largest Contig: 142,038 bp
• Assembly Length: 3,797,522 bp
• Ambiguous Assembly Fraction: 0.011%

Automated checks

Complete

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Last modified 6 months ago

Sample Metadata

BioSample entries

• BioSample: SAMN06453496

Date

Not detected

Location

Not detected

Toponym

Geo Loc Name: Canada:Athabasca Oil Sands

Environment

Sample Type: metagenomic assembly

Isolation Source: waste water

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN06453496: Uncultivated candidate division WOR-3 bacterium UBA2258 genome recovered from SRX559894

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Metadata retrieved 6 months ago