JSON

Genome sc|0000231

Name

“Gemmiger excrementavium”

Database

NCBI Assembly

Accession

GCA_019116485.1

Genomics

Accession
NCBI Assembly:GCA_019116485.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.89%
  • Contamination: 0.68%
  • Quality: 89.49
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 16 amino acids
Source
Other features
  • G+C Content: 60.89%
  • Coding Density: 90.14%
  • Codon Table: 11
  • N50: 21,701 bp
  • Contigs: 177
  • Largest Contig: 100,926 bp
  • Assembly Length: 2,525,858 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 11 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015-08-19
Location
Not detected
Toponym
Geo Loc Name: China:Hunan
Environment
Sample Type: metagenomic assembly
Isolation Source: colorectum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323264
All retrieved samples
Metadata retrieved 11 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license