Genome sc|0002316

Genomics

Accession

NCBI Assembly:SAMN40176692

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 97.2%
• Contamination: 1.87%
• Quality: 87.85

Sequencing depth

45.0 ×

Source

• SRA: SRX23813131

Other features

• G+C Content: 49.6%

Automated checks

Failed: Cannot find ncbi:assembly:SAMN40176692

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Last modified 6 months ago

Sample Metadata

BioSample entries

• BioSample: SRS20635743

Date

Collection Date: 2019-10-26

Location

Lat Lon: 38.41 N 122.31 W

Toponym

Geo Loc Name: USA: California, Lake County

Environment

Sample Type: metagenomic assembly

Isolation Source: sediment of a seasonal wetland

Env Broad Scale: temperate woodland biome [ENVO:01000221]

Env Local Scale: lake bottom mud [ENVO:00005797]

Env Medium: lake bottom mud [ENVO:00005797]

Other

Depth: 100cm

Package

Ncbi Submission Package: MIMAG.soil.6.0

Biosamplemodel: MIMAG.soil

Additional Accessions

SAMN21157288

All retrieved samples

• SRS20635743: SRVP18_Atabeyarchaeia-1

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Metadata retrieved 6 months ago